Heart single cell database

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August undefined, 2024

Web6 de nov. de 2024 · Single-cell RNA sequencing (scRNA-seq) technology is a powerful, rapidly developing tool for characterizing individual cells and elucidating biological mechanisms at the cellular level. Cardiovascular disease is one of the major causes of death worldwide and its precise pathology remains unclear. sc … WebSingle-cell RNA-Seq (scRNA-seq) are an emerging method which facilitates to explore the comprehensive transcriptome in a single cell. To provide a useful and unique reference resource for biology and medicine, we developed the scRNASeqDB database, which contains 36 human single cell gene expression data sets collected from Gene …

Single-cell transcriptome analysis of the zebrafish embryonic …

Web3 de oct. de 2024 · In conclusion, we have created a compendium of single-cell transcriptional measurements across 20 mouse organs. This Tabula Muris, or ‘Mouse Atlas’, has many uses, including the discovery of ... Web19 de mar. de 2024 · Using single-cell and spatial transcriptomics in chicken hearts, here, the authors generate a census of cellular interactions from early to late four-chambered … isabelle ithurburu taille

Single cell RNA-seq and ATAC-seq analysis of cardiac ... - Nature

Web4 de ago. de 2024 · Results: We sequenced the transcriptomes of 287 269 single cardiac nuclei, revealing 9 major cell types and 20 subclusters of cell types within the human heart. Cellular subclasses include 2 distinct groups of resident macrophages, 4 endothelial subtypes, and 2 fibroblast subsets. Web27 de abr. de 2024 · hbCOR – The Premier Database for Health Care. Sherman Hospital has been a client of heartbase since 2000. From the beginning, the customer service has … WebThe HCL database contains data visualization resources of 102 human cell types and 843 cell subtypes identified from 702,968 single-cell transcriptome data, and the scHCL can … isabelle ithurburu divorce

Single-cell atlas of the mouse embryonic heart

DISCO: a database of Deeply Integrated human Single-Cell Omics …

WebSingle Cell Expression Atlas supports research in single cell transcriptomics. The Atlas annotates publicly available single cell RNA-Seq experiments with ontology identifiers … Web28 de nov. de 2024 · To facilitate discovery with published single-cell transcriptomics data, we have assembled a near exhaustive, manually curated database of single-cell … isabelle izzy woutersWebSingle nuclei captured most of the cardiomyocytes, fibroblasts and adipocytes; whereas single cell/CD45+enriched single cell capture most of the vascular and immune cells. … old showboat stonewall jackson

"Web24 de sept. de 2024 · NEW YORK – Researchers have generated a molecular and cellular atlas of the human heart based on single-cell and single-nuclei transcriptome data. To … " - Heart single cell database

Heart single cell database

Transcriptional and Cellular Diversity of the Human Heart

Web4 de feb. de 2024 · The study is among the first to leverage big data, single-cell sequencing, and genomics to find new drug targets in heart disease. It’s a perfect example of the type of translational research that Khomtchouk sees as pivotal to the development of cardioinformatics, a field he brought into view by coining the term cardioinformatics in a … Web19 de nov. de 2024 · Cardiac progenitor cells (CPCs) form cardiomyocytes, pericytes, smooth muscle and endothelial cells during embryonic development. Here, the authors characterize mouse CPCs marked by Nkx2.5 and ...

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Web2 de oct. de 2024 · The pathology of CVDs could be related to the functional abnormalities of multiple cell types in the heart. Single-cell RNA sequencing (scRNA-seq) technology … Web5 de oct. de 2024 · Moreover, the known cell marks are extremely valuable to single-cell sequencing studies, in which they were widely used to label cell types for individual cells, enabling capture of the initial viewing of cell compositions. However, there is no database available for cell markers identified by single-cell RNA sequencing and experimental …

Web31 de ene. de 2024 · Sorting single cells from the adult heart. A, Schematic representation of the heart and all main cardiac cell types. B, Work flow of the protocol. C, Gating strategy to sort single cells based on different scatter properties. ... (Database I in the online-only Data Supplement). http://betsholtzlab.org/Publications/databases.html

WebThis chapter describes a pipeline for basic bioinformatics analysis of single-cell sequencing data (see Chap. 10: Single-Cell Library Preparation). Starting with raw sequencing data, we describe how to quality check samples, to create an index from a reference genome, to align the sequences to an index, and to quantify transcript abundances. Web4 de ago. de 2024 · Using large-scale single nuclei RNA sequencing, we defined the transcriptional and cellular diversity in the normal human heart. Our identification of …

Web4 de feb. de 2024 · With former Capstone students, he was building a database that aimed to collect all the existing single-cell genomic data relevant to cardiovascular disease. … old showboxWeb6 de nov. de 2024 · Single-cell RNA sequencing (scRNA-seq) technology is a powerful, rapidly developing tool for characterizing individual cells and elucidating biological … old showboat lyricsWebSingle Cell RNA-seq Gene Expression Data. Database of gene expression in adult mouse brain and lung vascular and perivascular cells. Citation: We provide this database … isabelle ithurburu photosWeb7 de ene. de 2024 · The ability to study cellular heterogeneity at single cell resolution is making single-cell sequencing increasingly popular. However, there is no publicly available resource that offers an integrated cell atlas with harmonized metadata that users can integrate new data with. Here, we present DISCO ( … old showbox app downloadWebCell type proteome. GENERAL INFORMATIONi. General description of the gene and the encoded protein (s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project. Gene namei. Official gene symbol, which is typically a short form of the gene name, according to HGNC. CTSG. old show cars for saleWeb6 de sept. de 2024 · Single-cell atlas of left ventricle revealed the changes of cell proportion ... Major cell types in heart, included CM, EC ... Heart disease-related gene sets and myocardial fibrosis gene sets were downloaded from the DisGeNET database . Cell-cell communication analysis. To identify cell–cell communication in ... old shower cartridgeWebThe Human Transcriptome Cell Atlas (HTCA) database provides a one-stop interactive query to single-cell transcriptomics, single-cell splicing variants, spatial transcriptomics, and single-cell ATAC-sequencing profiles of adult and fetal tissues. Online analysis tools are also provided. old showbox app